Package: sigQC 0.1.24
sigQC: Quality Control Metrics for Gene Signatures
Provides gene signature quality control metrics in publication ready plots. Namely, enables the visualization of properties such as expression, variability, correlation, and comparison of methods of standardisation and scoring metrics.
Authors:
sigQC_0.1.24.tar.gz
sigQC_0.1.24.zip(r-4.5)sigQC_0.1.24.zip(r-4.4)sigQC_0.1.24.zip(r-4.3)
sigQC_0.1.24.tgz(r-4.4-any)sigQC_0.1.24.tgz(r-4.3-any)
sigQC_0.1.24.tar.gz(r-4.5-noble)sigQC_0.1.24.tar.gz(r-4.4-noble)
sigQC_0.1.24.tgz(r-4.4-emscripten)sigQC_0.1.24.tgz(r-4.3-emscripten)
sigQC.pdf |sigQC.html✨
sigQC/json (API)
# Install 'sigQC' in R: |
install.packages('sigQC', repos = c('https://andrewdhawan.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/andrewdhawan/sigqc/issues
Last updated 3 months agofrom:9599d1380f. Checks:OK: 1 NOTE: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 16 2024 |
R-4.5-win | NOTE | Nov 16 2024 |
R-4.5-linux | NOTE | Nov 16 2024 |
R-4.4-win | NOTE | Nov 16 2024 |
R-4.4-mac | NOTE | Nov 16 2024 |
R-4.3-win | NOTE | Nov 16 2024 |
R-4.3-mac | NOTE | Nov 16 2024 |
Exports:make_all_plots
Dependencies:abindadditivityTestsannotateAnnotationDbiaskpassassortheadbeachmatBHbiclustBiobaseBiocFileCacheBiocGenericsBiocParallelBiocSingularBiostringsbitbit64bitopsblobcachemcaToolscirclizeclasscliclueclustercodetoolscolorspaceComplexHeatmapcpp11crayoncurlDBIdbplyrDelayedArrayDelayedMatrixStatsdigestdoParalleldplyrfansifarverfastmapfilelockflexclustfmsbforeachformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesGetoptLongggplot2GlobalOptionsgluegplotsgraphgridGraphicsGSEABaseGSVAgtablegtoolsHDF5ArrayhttrIRangesirlbaisobanditeratorsjsonliteKEGGRESTKernSmoothlabelinglambda.rlatticelifecyclemagickmagrittrMASSMatrixMatrixGenericsmatrixStatsmclustmemoisemgcvmimemodeltoolsmomentsmunsellnlmennetopensslpillarpkgconfigplogrpngpurrrR6RColorBrewerRcpprhdf5rhdf5filtersRhdf5librjsonrlangRSQLitersvdS4ArraysS4VectorsScaledMatrixscalesshapeSingleCellExperimentsnowSparseArraysparseMatrixStatsSpatialExperimentstringistringrSummarizedExperimentsystibbletidyrtidyselectUCSC.utilsutf8vctrsviridisLitewithrXMLxtableXVectorzlibbioc
Readme and manuals
Help Manual
Help page | Topics |
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make_all_plots.R | make_all_plots |